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HemOnc.org Editorial Meeting Q2 2023

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HemOnc.org Q2

0

R-CEOP

1

Where in the world is hematology?

1 Gómez-De León
~5000 abstracts reviewed, ~500 had author from LMICs
~5000 abstracts reviewed, ~500 had author from LMICs
2

Where in the world is hematology?

manual extraction is slow and ruins your back
manual extraction is slow and ruins your back
3

Right [patient, drug, time, dose, route, place]

Léon Tshilolo, MD, PhD. ASH 2018, speaking on hydroxyurea in Sub-Saharan Africa.
Léon Tshilolo, MD, PhD. ASH 2018, speaking on hydroxyurea in Sub-Saharan Africa.
4

Myopia

5

Gatekeeper/Guide

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7

Current project

What if we could automate the extraction and structuring of all ~100k abstracts?
What if we could automate the extraction and structuring of all ~100k abstracts?
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Current project

keep it public, keep it safe
keep it public, keep it safe
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Current project

analysis pipeline
analysis pipeline
10

Current project

BYOA (bring your own analysis)
BYOA (bring your own analysis)
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Planned analyses

  • trends
    • geographic
    • chronologic
    • topologic
    • ontologic
    • biographic
  • disparities
    • e.g. overlay maps of the disease itself (incidence, morbidity, etc.) and research about that disease
  • funding/resource allocation
h/t Hans Rosling
h/t Hans Rosling
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Challenges

Structure, standards

  • https://schema.datacite.org
  • FAIR
    • Findable
    • Accessible
    • Interoperable
    • Reusable
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Challenges

robots.txt

  • https://ashpublications.org/robots.txt
  • cf hiQ vs LinkedIn
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Challenges

missing, incomplete, wrong
missing, incomplete, wrong
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Challenges

Web scraping is the bug. Not sure who the other guy is.
Web scraping is the bug. Not sure who the other guy is.
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Challenges (also a feature)

If you can write SQL, you can analyze the data.
If you can write SQL, you can analyze the data.
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Challenges (also a feature)

ChatGPT to the rescue?
ChatGPT to the rescue?
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Show and tell (click here)

19
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